BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017F08LP1|AL427189
(925 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1271 1798 0.0
>3x_Contig1271
Length = 7459
Score = 1798 bits (906), Expect = 0.0
Identities = 921/926 (99%), Gaps = 1/926 (0%)
Strand = Plus / Minus
Query: 1 cttccttttattactatgaatcattcaaacagcataaattttttttttcttttaaaa-cc 59
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 1944 cttccttttattactatgaatcattcaaacagcataaattttttttttctttgaaaaacc 1885
Query: 60 gatcccaatttctacagtgaacatgcagtagaaacaacagaaatcagtgaggaagaaaaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1884 gatcccaatttctacagtgaacatgcagtagaaacaacagaaatcagtgaggaagaaaaa 1825
Query: 120 aaaaccaaataggaaaaaaagcgcctgcccctcagtggggcctcgcagattgaggtctcg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1824 aaaaccaaataggaaaaaaagcgcctgcccctcagtggggcctcgcagattgaggtctcg 1765
Query: 180 aatacgcgctagagagaagtctaaatttccggcggcgtacattagtacaatagagacacc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1764 aatacgcgctagagagaagtctaaatttccggcggcgtacattagtacaatagagacacc 1705
Query: 240 agtacctcatattttcatttcttttctgtttctttcttttcgtattcattttcatgtcaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1704 agtacctcatattttcatttcttttctgtttctttcttttcgtattcattttcatgtcaa 1645
Query: 300 aatagctgcttccagtatatctctcgaagagcgcaagtatgagttatatggattataggt 359
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1644 aatagctgcttccagtatatctctcgaagagcgcaagtatgagtaatatggattataggt 1585
Query: 360 gaataaacagaaaaaagagaaaagaaaaatgcatatacacacaaacacggagggccagga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1584 gaataaacagaaaaaagagaaaagaaaaatgcatatacacacaaacacggagggccagga 1525
Query: 420 aaaaaatatgcgatgtgaaattttcgttgttgttgattgtgggaaccataaatacgactg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 aaaaaatatgcgatgtgaaattttcgttgttgttgattgtgggaaccataaatacgactg 1465
Query: 480 gccctgggccttcatgaaacggacgtgaaggacatgctattgtcttatcatctttcttat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 gccctgggccttcatgaaacggacgtgaaggacatgctattgtcttatcatctttcttat 1405
Query: 540 tgaattttgtcttgaaattttttttacaattgcaaggaaccacacagaccttcggtaata 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 tgaattttgtcttgaaattttttttacaattgcaaggaaccacacagaccttcggtaata 1345
Query: 600 cctttttcactttcttttctttcaaattagtcgcacgtgacctagaactgattttcaatc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1344 cctttttcactttcttttctttcaaattagtcgcacgtgacctagaactgattttcaatc 1285
Query: 660 gaaaaacagaaaaagagaaaacaccgaaaccaaaagaaaccacacatatcacgtgaacat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 gaaaaacagaaaaagagaaaacaccgaaaccaaaagaaaccacacatatcacgtgaacat 1225
Query: 720 caaactagtatgtattaatttttttgcaagggaaaccgaaaactttcatctcaaggtaga 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1224 caaactagtatgtattaatttttttgcaagggaaaccgaaaactttcatctcaaggtaga 1165
Query: 780 tttggtggttttttaaagggatcttacgaatattcactgatgactattgaaaaatgggtt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 tttggtggttttttaaagggatcttacgaatattcactgatgactattgaaaaatgggtt 1105
Query: 840 tcgtcatttccagtttaggagcvatggacaccggtaacagaaatcggtcctgaattcaat 899
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1104 tcgtcatttccagtttaggagcaatggacaccggtaacagaaatcggtcctgaattcaat 1045
Query: 900 taaacggagatgtttaatatcggrgg 925
||||||||||||||||||||||| ||
Sbjct: 1044 taaacggagatgtttaatatcggagg 1019
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,151
Number of Sequences: 1807
Number of extensions: 13151
Number of successful extensions: 183
Number of sequences better than 1.0e-20: 1
length of query: 925
length of database: 10,358,551
effective HSP length: 16
effective length of query: 909
effective length of database: 10,329,639
effective search space: 9389641851
effective search space used: 9389641851
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)